Browse by research highlights: Precision Cancer Care Histology Image Analysis Real-World Healthcare Application Foundational AI Research Workshop on Insights from Negative Results in NLP at NAACL BMIRDS . 5/21/25 Workshop on Insights from Negative Results in NLP at NAACL BMIRDS . 5/21/25 Bridging the Faithfulness Gap in Prototypical Models Read More North American Chapter of the Association for Computational Linguistics (NAACL) BMIRDS . 4/23/25 North American Chapter of the Association for Computational Linguistics (NAACL) BMIRDS . 4/23/25 Communication Makes Perfect: Persuasion Dataset Construction via Multi-LLM Communication Read More International Conference International Conference on Learning Representations (ICLR) BMIRDS . 4/14/25 International Conference International Conference on Learning Representations (ICLR) BMIRDS . 4/14/25 ImpScore: A Learnable Metric For Quantifying The Implicitness Level of Sentence Read More Journals Journal of Clinical Microbiology BMIRDS . 2/24/25 Journals Journal of Clinical Microbiology BMIRDS . 2/24/25 A novel framework for the automated characterization of Gram-stained blood culture slides using a large-scale vision transformer Read More Advancements in Medical Foundation Models Workshop-NeurIPS 2024 BMIRDS . 12/9/24 Advancements in Medical Foundation Models Workshop-NeurIPS 2024 BMIRDS . 12/9/24 A Benchmark for Long-Form Medical Question Answering Read More BlackBoxNLP 2024 BMIRDS . 9/21/24 BlackBoxNLP 2024 BMIRDS . 9/21/24 IvRA: A Framework to Enhance Attention-Based Explanations for Language Models with Interpretability-Driven Training Read More Journal of Pathology Informatics BMIRDS . 5/31/24 Journal of Pathology Informatics BMIRDS . 5/31/24 Masked pre-training of transformers for histology image analysis Read More EMNLP 2023 Naofumi Tomita 12/6/23 EMNLP 2023 Naofumi Tomita 12/6/23 Proto-lm: A Prototypical Network-Based Framework for Built-in Interpretability in Large Language Models Read More Association for Computational Linguistics (ACL) Naofumi Tomita 7/9/23 Association for Computational Linguistics (ACL) Naofumi Tomita 7/9/23 Improving Syntactic Probing Correctness and Robustness with Control Tasks Read More ICPR 2022 BMIRDS . 11/29/22 ICPR 2022 BMIRDS . 11/29/22 Towards Interpretable Deep Reinforcement Learning Models via Inverse Reinforcement Learning Read More Journal of Biomedical Informatics Naofumi Tomita 10/6/20 Journal of Biomedical Informatics Naofumi Tomita 10/6/20 Multi-Ontology Refined Embeddings (MORE): A Hybrid Multi-Ontology and Corpus-based Semantic Representation Model for Biomedical Concepts Read More
Workshop on Insights from Negative Results in NLP at NAACL BMIRDS . 5/21/25 Workshop on Insights from Negative Results in NLP at NAACL BMIRDS . 5/21/25 Bridging the Faithfulness Gap in Prototypical Models Read More
North American Chapter of the Association for Computational Linguistics (NAACL) BMIRDS . 4/23/25 North American Chapter of the Association for Computational Linguistics (NAACL) BMIRDS . 4/23/25 Communication Makes Perfect: Persuasion Dataset Construction via Multi-LLM Communication Read More
International Conference International Conference on Learning Representations (ICLR) BMIRDS . 4/14/25 International Conference International Conference on Learning Representations (ICLR) BMIRDS . 4/14/25 ImpScore: A Learnable Metric For Quantifying The Implicitness Level of Sentence Read More
Journals Journal of Clinical Microbiology BMIRDS . 2/24/25 Journals Journal of Clinical Microbiology BMIRDS . 2/24/25 A novel framework for the automated characterization of Gram-stained blood culture slides using a large-scale vision transformer Read More
Advancements in Medical Foundation Models Workshop-NeurIPS 2024 BMIRDS . 12/9/24 Advancements in Medical Foundation Models Workshop-NeurIPS 2024 BMIRDS . 12/9/24 A Benchmark for Long-Form Medical Question Answering Read More
BlackBoxNLP 2024 BMIRDS . 9/21/24 BlackBoxNLP 2024 BMIRDS . 9/21/24 IvRA: A Framework to Enhance Attention-Based Explanations for Language Models with Interpretability-Driven Training Read More
Journal of Pathology Informatics BMIRDS . 5/31/24 Journal of Pathology Informatics BMIRDS . 5/31/24 Masked pre-training of transformers for histology image analysis Read More
EMNLP 2023 Naofumi Tomita 12/6/23 EMNLP 2023 Naofumi Tomita 12/6/23 Proto-lm: A Prototypical Network-Based Framework for Built-in Interpretability in Large Language Models Read More
Association for Computational Linguistics (ACL) Naofumi Tomita 7/9/23 Association for Computational Linguistics (ACL) Naofumi Tomita 7/9/23 Improving Syntactic Probing Correctness and Robustness with Control Tasks Read More
ICPR 2022 BMIRDS . 11/29/22 ICPR 2022 BMIRDS . 11/29/22 Towards Interpretable Deep Reinforcement Learning Models via Inverse Reinforcement Learning Read More
Journal of Biomedical Informatics Naofumi Tomita 10/6/20 Journal of Biomedical Informatics Naofumi Tomita 10/6/20 Multi-Ontology Refined Embeddings (MORE): A Hybrid Multi-Ontology and Corpus-based Semantic Representation Model for Biomedical Concepts Read More